Outer membrane protease OmpT from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF01278
PDB ID: 1I78
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 10
Sequence positions:
A: 12-18|53-60|63-70|113-121|126-134|180-188|192-199|233-241|245-251|290-296
Tilt angles:
A - Segment: 12-18 - Tilt: 38.7°
A - Segment: 53-60 - Tilt: 39.3°
A - Segment: 63-70 - Tilt: 38.3°
A - Segment: 113-121 - Tilt: 38.5°
A - Segment: 126-134 - Tilt: 40.7°
A - Segment: 180-188 - Tilt: 45.1°
A - Segment: 192-199 - Tilt: 48.0°
A - Segment: 233-241 - Tilt: 44.7°
A - Segment: 245-251 - Tilt: 31.8°
A - Segment: 290-296 - Tilt: 27.1°
Structural assessment:
MAIDEN score = 16.2915
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]