Outer membrane protease OmpT from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF01278
PDB ID: 1I78
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 10
Sequence positions:
A: 22-28|40-46|80-85|95-101|108-152|155-164|194-201|229-236|251-257|281-288
Tilt angles:
A - Segment: 22-28 - Tilt: 35.3°
A - Segment: 40-46 - Tilt: 30.5°
A - Segment: 80-85 - Tilt: 31.0°
A - Segment: 95-101 - Tilt: 31.1°
A - Segment: 108-152 - Tilt: 62.5°
A - Segment: 155-164 - Tilt: 38.7°
A - Segment: 194-201 - Tilt: 40.9°
A - Segment: 229-236 - Tilt: 37.1°
A - Segment: 251-257 - Tilt: 33.5°
A - Segment: 281-288 - Tilt: 39.2°
Structural assessment:
MAIDEN score = 310.5851
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]