LH3 Complex from Rhodopseudomonas acidophila strain 7050
Organism: Rhodopseudomonas acidophila
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00556
PDB ID: 1IJD
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.0 Å
Number of TM segments = 6
Sequence positions:
A: 11-32
C: 98-119
B: 58-80
E: 183-204
D: 146-168
F: 231-253
Tilt angles:
A - Segment: 11-32 - Tilt: 17.9°
C - Segment: 98-119 - Tilt: 24.0°
B - Segment: 58-80 - Tilt: 20.0°
E - Segment: 183-204 - Tilt: 28.2°
D - Segment: 146-168 - Tilt: 25.1°
F - Segment: 231-253 - Tilt: 29.2°
Structural assessment:
MAIDEN score = -28.4394
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]