AQP1 water channel
Organism: Bos taurus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00230
PDB ID: 1J4N
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.2 Å
Number of TM segments = 6
Sequence positions:
A: 11-30|52-70|93-113|141-158|168-185|212-233
Tilt angles:
A - Segment: 11-30 - Tilt: 29.8°
A - Segment: 52-70 - Tilt: 29.0°
A - Segment: 93-113 - Tilt: 43.9°
A - Segment: 141-158 - Tilt: 30.2°
A - Segment: 168-185 - Tilt: 31.2°
A - Segment: 212-233 - Tilt: 42.7°
Structural assessment:
MAIDEN score = -55.2615
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]