AQP1 water channel
Organism: Bos taurus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00230
PDB ID: 1J4N
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.0 Å
Number of TM segments = 6
Sequence positions:
A: 12-33|50-70|92-117|138-158|167-186|210-234
Tilt angles:
A - Segment: 12-33 - Tilt: 22.1°
A - Segment: 50-70 - Tilt: 19.2°
A - Segment: 92-117 - Tilt: 42.9°
A - Segment: 138-158 - Tilt: 28.4°
A - Segment: 167-186 - Tilt: 21.9°
A - Segment: 210-234 - Tilt: 32.6°
Structural assessment:
MAIDEN score = -35.7704
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]