OpcA Outer Membrane Adhesin/Invasin from Neisseria meningitidis
Organism: Neisseria meningitidis
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF07239
PDB ID: 1K24
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 9
Sequence positions:
A: 9-26|29-40|52-58|88-94|114-120|133-138|162-170|182-192|201-225
Tilt angles:
A - Segment: 9-26 - Tilt: 66.7°
A - Segment: 29-40 - Tilt: 65.7°
A - Segment: 52-58 - Tilt: 41.1°
A - Segment: 88-94 - Tilt: 33.8°
A - Segment: 114-120 - Tilt: 25.0°
A - Segment: 133-138 - Tilt: 18.2°
A - Segment: 162-170 - Tilt: 31.7°
A - Segment: 182-192 - Tilt: 53.0°
A - Segment: 201-225 - Tilt: 74.3°
Structural assessment:
MAIDEN score = 3.6088
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]