Bacterial ABC Transporter Involved in B12 Uptake
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01032
PDB ID: 1L7V
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 16
Sequence positions:
A: 15-31|57-77|85-101|114-132|145-160|190-205|276-294|304-319
B: 337-352|384-401|409-427|439-456|469-484|515-530|599-615|629-644
Tilt angles:
A - Segment: 15-31 - Tilt: 5.3°
A - Segment: 57-77 - Tilt: 38.7°
A - Segment: 85-101 - Tilt: 36.0°
A - Segment: 114-132 - Tilt: 36.5°
A - Segment: 145-160 - Tilt: 11.1°
A - Segment: 190-205 - Tilt: 9.1°
A - Segment: 276-294 - Tilt: 28.3°
A - Segment: 304-319 - Tilt: 24.8°
B - Segment: 337-352 - Tilt: 6.4°
B - Segment: 384-401 - Tilt: 32.8°
B - Segment: 409-427 - Tilt: 42.8°
B - Segment: 439-456 - Tilt: 37.9°
B - Segment: 469-484 - Tilt: 16.5°
B - Segment: 515-530 - Tilt: 10.6°
B - Segment: 599-615 - Tilt: 19.1°
B - Segment: 629-644 - Tilt: 24.5°
Structural assessment:
MAIDEN score = -69.6370
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]