Model of Neurospora crassa proton ATPase
Organism: Neurospora crassa
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 1MHS
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 35.1 Å
Number of TM segments = 20
Sequence positions:
A: 112-135|142-163|290-312|319-341|689-713|716-737|757-783|793-813|818-846|852-876
B: 113-136|142-164|291-313|318-341|687-712|716-738|757-781|794-815|817-843|855-878
Tilt angles:
A - Segment: 112-135 - Tilt: 14.6°
A - Segment: 142-163 - Tilt: 3.9°
A - Segment: 290-312 - Tilt: 8.2°
A - Segment: 319-341 - Tilt: 27.1°
A - Segment: 689-713 - Tilt: 4.6°
A - Segment: 716-737 - Tilt: 14.7°
A - Segment: 757-783 - Tilt: 27.8°
A - Segment: 793-813 - Tilt: 4.5°
A - Segment: 818-846 - Tilt: 30.8°
A - Segment: 852-876 - Tilt: 24.1°
B - Segment: 113-136 - Tilt: 23.7°
B - Segment: 142-164 - Tilt: 17.7°
B - Segment: 291-313 - Tilt: 13.7°
B - Segment: 318-341 - Tilt: 31.2°
B - Segment: 687-712 - Tilt: 25.2°
B - Segment: 716-738 - Tilt: 27.2°
B - Segment: 757-781 - Tilt: 10.4°
B - Segment: 794-815 - Tilt: 18.6°
B - Segment: 817-843 - Tilt: 30.3°
B - Segment: 855-878 - Tilt: 28.6°
Structural assessment:
MAIDEN score = -165.1678
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]