Model of Neurospora crassa proton ATPase
Organism: Neurospora crassa
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 1MHS
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.8 Å
Number of TM segments = 20
Sequence positions:
A: 114-135|141-160|292-312|319-337|691-712|715-735|759-783|792-812|827-847|850-874
B: 1036-1058|1060-1079|1213-1234|1237-1257|1610-1632|1635-1656|1679-1701|1713-1733|1738-1765|1772-1798
Tilt angles:
A - Segment: 114-135 - Tilt: 14.4°
A - Segment: 141-160 - Tilt: 4.2°
A - Segment: 292-312 - Tilt: 7.5°
A - Segment: 319-337 - Tilt: 19.0°
A - Segment: 691-712 - Tilt: 9.5°
A - Segment: 715-735 - Tilt: 7.5°
A - Segment: 759-783 - Tilt: 34.0°
A - Segment: 792-812 - Tilt: 13.6°
A - Segment: 827-847 - Tilt: 16.1°
A - Segment: 850-874 - Tilt: 37.1°
B - Segment: 1036-1058 - Tilt: 21.7°
B - Segment: 1060-1079 - Tilt: 18.8°
B - Segment: 1213-1234 - Tilt: 11.9°
B - Segment: 1237-1257 - Tilt: 26.1°
B - Segment: 1610-1632 - Tilt: 25.6°
B - Segment: 1635-1656 - Tilt: 21.5°
B - Segment: 1679-1701 - Tilt: 17.0°
B - Segment: 1713-1733 - Tilt: 18.2°
B - Segment: 1738-1765 - Tilt: 44.2°
B - Segment: 1772-1798 - Tilt: 38.8°
Structural assessment:
MAIDEN score = -141.8859
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]