LH2 B800-850 from Rps. acidophila at 2.0 Å resolution
Organism: Rhodopseudomonas acidophila
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00556
PDB ID: 1NKZ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.9 Å
Number of TM segments = 6
Sequence positions:
A: 25-38
C: 25-38
B: 23-37
E: 25-38
D: 24-37
F: 24-37
Tilt angles:
A - Segment: 25-38 - Tilt: 11.3°
C - Segment: 25-38 - Tilt: 11.6°
B - Segment: 23-37 - Tilt: 13.3°
E - Segment: 25-38 - Tilt: 12.0°
D - Segment: 24-37 - Tilt: 14.7°
F - Segment: 24-37 - Tilt: 14.3°
Structural assessment:
MAIDEN score = -47.0187
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]