Neisserial surface protein A (NSPA)
Organism: Neisseria meningitidis
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF02462
PDB ID: 1P4T
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 5
Sequence positions:
A: 41-49|61-69|83-89|105-113|121-136
Tilt angles:
A - Segment: 41-49 - Tilt: 42.8°
A - Segment: 61-69 - Tilt: 28.8°
A - Segment: 83-89 - Tilt: 17.4°
A - Segment: 105-113 - Tilt: 43.9°
A - Segment: 121-136 - Tilt: 61.4°
Structural assessment:
MAIDEN score = -8.9213
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]