Bovine cytochrome bc1 complex with stigmatellin bound
Organism: Bos taurus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00033
PDB ID: 1PP9
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.1 Å
Number of TM segments = 24
Sequence positions:
C: 28-46|89-107|110-126|184-198|224-239|292-308|319-334|353-369
E: 37-55
D: 208-223
G: 33-56
J: 18-32
Q: 208-223
P: 29-46|86-103|112-126|184-197|225-241|289-304|322-336|350-366
R: 37-55
T: 44-59
W: 17-35
Tilt angles:
C - Segment: 28-46 - Tilt: 48.3°
C - Segment: 89-107 - Tilt: 38.6°
C - Segment: 110-126 - Tilt: 22.7°
C - Segment: 184-198 - Tilt: 17.8°
C - Segment: 224-239 - Tilt: 5.3°
C - Segment: 292-308 - Tilt: 25.0°
C - Segment: 319-334 - Tilt: 14.2°
C - Segment: 353-369 - Tilt: 6.9°
E - Segment: 37-55 - Tilt: 38.5°
D - Segment: 208-223 - Tilt: 9.3°
G - Segment: 33-56 - Tilt: 45.5°
J - Segment: 18-32 - Tilt: 26.5°
Q - Segment: 208-223 - Tilt: 4.7°
P - Segment: 29-46 - Tilt: 48.0°
P - Segment: 86-103 - Tilt: 39.6°
P - Segment: 112-126 - Tilt: 7.6°
P - Segment: 184-197 - Tilt: 23.0°
P - Segment: 225-241 - Tilt: 24.7°
P - Segment: 289-304 - Tilt: 30.9°
P - Segment: 322-336 - Tilt: 14.6°
P - Segment: 350-366 - Tilt: 15.9°
R - Segment: 37-55 - Tilt: 36.8°
T - Segment: 44-59 - Tilt: 22.5°
W - Segment: 17-35 - Tilt: 32.3°
Structural assessment:
MAIDEN score = -210.8916
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]