Lactose permease
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01306
PDB ID: 1PV6
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 12
Sequence positions:
A: 7-34|41-60|76-99|103-126|140-158|168-187|225-244|261-283|289-307|315-333|354-373|378-398
Tilt angles:
A - Segment: 7-34 - Tilt: 47.6°
A - Segment: 41-60 - Tilt: 19.3°
A - Segment: 76-99 - Tilt: 32.6°
A - Segment: 103-126 - Tilt: 49.1°
A - Segment: 140-158 - Tilt: 15.5°
A - Segment: 168-187 - Tilt: 25.3°
A - Segment: 225-244 - Tilt: 25.8°
A - Segment: 261-283 - Tilt: 32.1°
A - Segment: 289-307 - Tilt: 14.7°
A - Segment: 315-333 - Tilt: 5.8°
A - Segment: 354-373 - Tilt: 17.8°
A - Segment: 378-398 - Tilt: 31.6°
Structural assessment:
MAIDEN score = -70.0903
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]