Outer membrane phospholipase a from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF02253
PDB ID: 1QD5
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.4 Å
Number of TM segments = 12
Sequence positions:
A: 39-46|63-72|90-103|106-119|138-146|154-161|172-180|191-199|209-216|220-226|239-249|256-262
Tilt angles:
A - Segment: 39-46 - Tilt: 34.1°
A - Segment: 63-72 - Tilt: 45.2°
A - Segment: 90-103 - Tilt: 64.3°
A - Segment: 106-119 - Tilt: 65.3°
A - Segment: 138-146 - Tilt: 52.9°
A - Segment: 154-161 - Tilt: 34.4°
A - Segment: 172-180 - Tilt: 41.8°
A - Segment: 191-199 - Tilt: 13.9°
A - Segment: 209-216 - Tilt: 38.6°
A - Segment: 220-226 - Tilt: 32.0°
A - Segment: 239-249 - Tilt: 45.1°
A - Segment: 256-262 - Tilt: 30.5°
Structural assessment:
MAIDEN score = -12.5564
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]