Outer membrane protein A (OMPA) transmembrane domain
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF01389
PDB ID: 1QJP
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.6 Å
Number of TM segments = 7
Sequence positions:
A: 10-16|33-42|48-62|73-87|91-105|117-129|137-144
Tilt angles:
A - Segment: 10-16 - Tilt: 17.5°
A - Segment: 33-42 - Tilt: 43.3°
A - Segment: 48-62 - Tilt: 61.1°
A - Segment: 73-87 - Tilt: 64.5°
A - Segment: 91-105 - Tilt: 56.8°
A - Segment: 117-129 - Tilt: 51.3°
A - Segment: 137-144 - Tilt: 30.2°
Structural assessment:
MAIDEN score = 12.0910
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]