Bovine rhodopsin at 2.2 Å Resolution
Organism: Bos taurus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00001
PDB ID: 1U19
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 25.5 Å
Number of TM segments = 7
Sequence positions:
A: 35-52|79-101|103-133|156-175|203-228|254-270|289-302
Tilt angles:
A - Segment: 35-52 - Tilt: 31.1°
A - Segment: 79-101 - Tilt: 40.0°
A - Segment: 103-133 - Tilt: 55.9°
A - Segment: 156-175 - Tilt: 23.0°
A - Segment: 203-228 - Tilt: 50.5°
A - Segment: 254-270 - Tilt: 10.8°
A - Segment: 289-302 - Tilt: 19.0°
Structural assessment:
MAIDEN score = -87.6916
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]