Bovine rhodopsin at 2.2 Å Resolution
Organism: Bos taurus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00001
PDB ID: 1U19
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.0 Å
Number of TM segments = 7
Sequence positions:
A: 46-64|71-91|112-136|153-175|202-235|248-266|294-330
Tilt angles:
A - Segment: 46-64 - Tilt: 10.9°
A - Segment: 71-91 - Tilt: 22.7°
A - Segment: 112-136 - Tilt: 40.9°
A - Segment: 153-175 - Tilt: 31.0°
A - Segment: 202-235 - Tilt: 55.1°
A - Segment: 248-266 - Tilt: 23.7°
A - Segment: 294-330 - Tilt: 33.6°
Structural assessment:
MAIDEN score = -78.7958
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]