Methanococcus jannaschii ribosome-SecYEBeta channel complex
Organism: Methanococcus jannaschii
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00344
PDB ID: 1VVK
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.0 Å
Number of TM segments = 10
Sequence positions:
8: 31-48
7: 37-59
X: 28-46|54-84|112-129|140-158|169-189|209-225|255-276|294-330
Tilt angles:
8 - Segment: 31-48 - Tilt: 8.1°
7 - Segment: 37-59 - Tilt: 47.8°
X - Segment: 28-46 - Tilt: 33.8°
X - Segment: 54-84 - Tilt: 28.0°
X - Segment: 112-129 - Tilt: 15.3°
X - Segment: 140-158 - Tilt: 32.5°
X - Segment: 169-189 - Tilt: 33.2°
X - Segment: 209-225 - Tilt: 13.1°
X - Segment: 255-276 - Tilt: 40.6°
X - Segment: 294-330 - Tilt: 20.7°
Structural assessment:
MAIDEN score = -70.2475
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]