Methanococcus jannaschii ribosome-SecYEBeta channel complex
Organism: Methanococcus jannaschii
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00344
PDB ID: 1VVK
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.0 Å
Number of TM segments = 10
Sequence positions:
8: 76-94
7: 36-61
X: 747-764|772-802|829-847|856-876|887-912|927-943|973-994|1013-1047
Tilt angles:
8 - Segment: 76-94 - Tilt: 4.9°
7 - Segment: 36-61 - Tilt: 51.5°
X - Segment: 747-764 - Tilt: 30.0°
X - Segment: 772-802 - Tilt: 30.1°
X - Segment: 829-847 - Tilt: 6.3°
X - Segment: 856-876 - Tilt: 34.1°
X - Segment: 887-912 - Tilt: 44.3°
X - Segment: 927-943 - Tilt: 15.3°
X - Segment: 973-994 - Tilt: 39.2°
X - Segment: 1013-1047 - Tilt: 13.3°
Structural assessment:
MAIDEN score = -105.5808
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]