SR CA2+-ATPase with MGF4
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 1WPG
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.1 Å
Number of TM segments = 40
Sequence positions:
A: 61-76|87-101|261-277|292-310|764-783|785-803|838-852|897-913|933-948|967-981
C: 61-76|88-103|263-279|291-310|763-783|785-806|837-852|897-914|931-947|967-983
B: 60-74|89-104|260-276|295-314|763-781|787-806|835-850|900-915|931-947|970-984
D: 61-76|88-103|261-277|292-310|766-783|785-803|839-854|897-912|934-948|966-980
Tilt angles:
A - Segment: 61-76 - Tilt: 12.5°
A - Segment: 87-101 - Tilt: 13.9°
A - Segment: 261-277 - Tilt: 36.5°
A - Segment: 292-310 - Tilt: 52.1°
A - Segment: 764-783 - Tilt: 33.1°
A - Segment: 785-803 - Tilt: 43.1°
A - Segment: 838-852 - Tilt: 14.4°
A - Segment: 897-913 - Tilt: 30.1°
A - Segment: 933-948 - Tilt: 16.2°
A - Segment: 967-981 - Tilt: 24.1°
C - Segment: 61-76 - Tilt: 15.1°
C - Segment: 88-103 - Tilt: 25.6°
C - Segment: 263-279 - Tilt: 37.7°
C - Segment: 291-310 - Tilt: 52.7°
C - Segment: 763-783 - Tilt: 36.3°
C - Segment: 785-806 - Tilt: 47.2°
C - Segment: 837-852 - Tilt: 5.9°
C - Segment: 897-914 - Tilt: 30.7°
C - Segment: 931-947 - Tilt: 36.7°
C - Segment: 967-983 - Tilt: 28.3°
B - Segment: 60-74 - Tilt: 14.7°
B - Segment: 89-104 - Tilt: 20.0°
B - Segment: 260-276 - Tilt: 38.9°
B - Segment: 295-314 - Tilt: 50.9°
B - Segment: 763-781 - Tilt: 42.2°
B - Segment: 787-806 - Tilt: 40.9°
B - Segment: 835-850 - Tilt: 10.3°
B - Segment: 900-915 - Tilt: 18.4°
B - Segment: 931-947 - Tilt: 32.5°
B - Segment: 970-984 - Tilt: 24.9°
D - Segment: 61-76 - Tilt: 7.5°
D - Segment: 88-103 - Tilt: 26.3°
D - Segment: 261-277 - Tilt: 40.2°
D - Segment: 292-310 - Tilt: 52.5°
D - Segment: 766-783 - Tilt: 26.1°
D - Segment: 785-803 - Tilt: 44.0°
D - Segment: 839-854 - Tilt: 10.5°
D - Segment: 897-912 - Tilt: 23.2°
D - Segment: 934-948 - Tilt: 22.5°
D - Segment: 966-980 - Tilt: 20.7°
Structural assessment:
MAIDEN score = -416.2097
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]