SR CA2+-ATPase with MGF4
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 1WPG
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.7 Å
Number of TM segments = 38
Sequence positions:
A: 60-75|88-103|260-276|292-311|763-781|786-806|836-851|898-914|931-947|967-983
C: 2049-2064|2076-2091|2248-2267|2279-2299|2751-2771|2773-2794|2824-2839|2886-2902|2918-2935|2955-2971
B: 1054-1069|1082-1097|1254-1270|1286-1305|1757-1775|1780-1798|1830-1845|1891-1908|1925-1941|1961-1977
D: 3043-3058|3068-3083|3245-3261|3273-3292|3822-3836|3877-3892|3916-3932|3944-3960
Tilt angles:
A - Segment: 60-75 - Tilt: 6.3°
A - Segment: 88-103 - Tilt: 20.7°
A - Segment: 260-276 - Tilt: 38.4°
A - Segment: 292-311 - Tilt: 46.7°
A - Segment: 763-781 - Tilt: 41.3°
A - Segment: 786-806 - Tilt: 39.4°
A - Segment: 836-851 - Tilt: 11.3°
A - Segment: 898-914 - Tilt: 19.8°
A - Segment: 931-947 - Tilt: 30.1°
A - Segment: 967-983 - Tilt: 28.5°
C - Segment: 2049-2064 - Tilt: 14.3°
C - Segment: 2076-2091 - Tilt: 26.1°
C - Segment: 2248-2267 - Tilt: 41.9°
C - Segment: 2279-2299 - Tilt: 49.0°
C - Segment: 2751-2771 - Tilt: 37.6°
C - Segment: 2773-2794 - Tilt: 46.1°
C - Segment: 2824-2839 - Tilt: 7.7°
C - Segment: 2886-2902 - Tilt: 23.0°
C - Segment: 2918-2935 - Tilt: 32.3°
C - Segment: 2955-2971 - Tilt: 24.8°
B - Segment: 1054-1069 - Tilt: 4.8°
B - Segment: 1082-1097 - Tilt: 21.5°
B - Segment: 1254-1270 - Tilt: 37.0°
B - Segment: 1286-1305 - Tilt: 44.2°
B - Segment: 1757-1775 - Tilt: 39.9°
B - Segment: 1780-1798 - Tilt: 33.5°
B - Segment: 1830-1845 - Tilt: 12.0°
B - Segment: 1891-1908 - Tilt: 22.6°
B - Segment: 1925-1941 - Tilt: 29.2°
B - Segment: 1961-1977 - Tilt: 28.3°
D - Segment: 3043-3058 - Tilt: 5.9°
D - Segment: 3068-3083 - Tilt: 15.8°
D - Segment: 3245-3261 - Tilt: 32.4°
D - Segment: 3273-3292 - Tilt: 48.5°
D - Segment: 3822-3836 - Tilt: 11.0°
D - Segment: 3877-3892 - Tilt: 18.3°
D - Segment: 3916-3932 - Tilt: 24.2°
D - Segment: 3944-3960 - Tilt: 21.3°
Structural assessment:
MAIDEN score = -302.1006
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]