Anabaena sensory rhodopsin
Organism: Nostoc sp.
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 1XIO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 30.6 Å
Number of TM segments = 7
Sequence positions:
A: 3-24|38-56|68-87|102-122|126-146|168-190|196-216
Tilt angles:
A - Segment: 3-24 - Tilt: 22.0°
A - Segment: 38-56 - Tilt: 11.7°
A - Segment: 68-87 - Tilt: 4.4°
A - Segment: 102-122 - Tilt: 11.9°
A - Segment: 126-146 - Tilt: 19.9°
A - Segment: 168-190 - Tilt: 19.1°
A - Segment: 196-216 - Tilt: 5.6°
Structural assessment:
MAIDEN score = -84.7126
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]