Anabaena sensory rhodopsin
Organism: Nostoc sp.
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01036
PDB ID: 1XIO
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 31.5 Å
Number of TM segments = 7
Sequence positions:
A: 3-24|36-56|59-78|93-113|116-137|159-181|183-207
Tilt angles:
A - Segment: 3-24 - Tilt: 21.7°
A - Segment: 36-56 - Tilt: 9.9°
A - Segment: 59-78 - Tilt: 2.5°
A - Segment: 93-113 - Tilt: 12.9°
A - Segment: 116-137 - Tilt: 15.9°
A - Segment: 159-181 - Tilt: 18.9°
A - Segment: 183-207 - Tilt: 26.7°
Structural assessment:
MAIDEN score = -65.5454
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]