Particulate methane monooxygenase
Organism: Methylococcus capsulatus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02461
PDB ID: 1YEW
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 9
Sequence positions:
A: 185-204|236-257
C: 52-70|92-113|137-155|175-194
B: 26-42|64-81|86-107
Tilt angles:
A - Segment: 185-204 - Tilt: 29.0°
A - Segment: 236-257 - Tilt: 38.9°
C - Segment: 52-70 - Tilt: 15.5°
C - Segment: 92-113 - Tilt: 36.8°
C - Segment: 137-155 - Tilt: 27.4°
C - Segment: 175-194 - Tilt: 29.6°
B - Segment: 26-42 - Tilt: 5.2°
B - Segment: 64-81 - Tilt: 23.9°
B - Segment: 86-107 - Tilt: 47.9°
Structural assessment:
MAIDEN score = -75.9687
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]