The Channel Architecture of Aquaporin O at 2.2 Å Resolution
Organism: Bos taurus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00230
PDB ID: 1YMG
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.6 Å
Number of TM segments = 6
Sequence positions:
A: 10-30|42-60|83-104|128-149|157-176|201-223
Tilt angles:
A - Segment: 10-30 - Tilt: 31.3°
A - Segment: 42-60 - Tilt: 26.2°
A - Segment: 83-104 - Tilt: 41.7°
A - Segment: 128-149 - Tilt: 34.2°
A - Segment: 157-176 - Tilt: 23.2°
A - Segment: 201-223 - Tilt: 41.5°
Structural assessment:
MAIDEN score = -62.1092
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]