The Channel Architecture of Aquaporin O at 2.2 Å Resolution
Organism: Bos taurus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00230
PDB ID: 1YMG
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.0 Å
Number of TM segments = 6
Sequence positions:
A: 11-27|33-49|77-102|128-140|156-168|198-217
Tilt angles:
A - Segment: 11-27 - Tilt: 42.8°
A - Segment: 33-49 - Tilt: 38.8°
A - Segment: 77-102 - Tilt: 65.0°
A - Segment: 128-140 - Tilt: 10.3°
A - Segment: 156-168 - Tilt: 10.4°
A - Segment: 198-217 - Tilt: 49.7°
Structural assessment:
MAIDEN score = -28.9980
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]