Spinach aquaporin SoPIP2
Organism: Spinacia oleracea
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00230
PDB ID: 1Z98
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.8 Å
Number of TM segments = 6
Sequence positions:
A: 14-42|44-69|73-122|142-160|174-191|219-243
Tilt angles:
A - Segment: 14-42 - Tilt: 50.5°
A - Segment: 44-69 - Tilt: 45.1°
A - Segment: 73-122 - Tilt: 38.1°
A - Segment: 142-160 - Tilt: 6.0°
A - Segment: 174-191 - Tilt: 20.3°
A - Segment: 219-243 - Tilt: 36.3°
Structural assessment:
MAIDEN score = -54.1712
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]