Rhodobacter capsulatus cytochrome bc1 complex with stigmatellin bound
Organism: Rhodobacter capsulatus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00033
PDB ID: 1ZRT
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 28.0 Å
Number of TM segments = 20
Sequence positions:
C: 43-64|96-117|127-146|196-213|249-268|330-349|362-381|389-408
E: 14-36
D: 227-245
Q: 227-245
P: 43-64|96-117|127-146|196-213|249-269|295-347|363-381|388-408
R: 14-36
Tilt angles:
C - Segment: 43-64 - Tilt: 45.6°
C - Segment: 96-117 - Tilt: 43.5°
C - Segment: 127-146 - Tilt: 17.8°
C - Segment: 196-213 - Tilt: 22.0°
C - Segment: 249-268 - Tilt: 13.4°
C - Segment: 330-349 - Tilt: 18.8°
C - Segment: 362-381 - Tilt: 19.7°
C - Segment: 389-408 - Tilt: 16.0°
E - Segment: 14-36 - Tilt: 32.6°
D - Segment: 227-245 - Tilt: 7.4°
Q - Segment: 227-245 - Tilt: 6.6°
P - Segment: 43-64 - Tilt: 44.1°
P - Segment: 96-117 - Tilt: 42.4°
P - Segment: 127-146 - Tilt: 17.4°
P - Segment: 196-213 - Tilt: 20.7°
P - Segment: 249-269 - Tilt: 20.4°
P - Segment: 295-347 - Tilt: 20.7°
P - Segment: 363-381 - Tilt: 11.0°
P - Segment: 388-408 - Tilt: 22.9°
R - Segment: 14-36 - Tilt: 32.0°
Structural assessment:
MAIDEN score = -237.9425
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]