SR CA2+-ATPASE with BHQ and TG
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00122
PDB ID: 2AGV
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.2 Å
Number of TM segments = 20
Sequence positions:
A: 61-77|85-99|260-274|294-309|763-780|786-803|835-851|897-914|934-958|967-984
B: 1056-1071|1080-1094|1257-1273|1285-1304|1758-1777|1779-1797|1831-1845|1891-1908|1925-1941|1961-1977
Tilt angles:
A - Segment: 61-77 - Tilt: 27.8°
A - Segment: 85-99 - Tilt: 14.2°
A - Segment: 260-274 - Tilt: 26.0°
A - Segment: 294-309 - Tilt: 31.7°
A - Segment: 763-780 - Tilt: 37.6°
A - Segment: 786-803 - Tilt: 30.5°
A - Segment: 835-851 - Tilt: 32.1°
A - Segment: 897-914 - Tilt: 32.1°
A - Segment: 934-958 - Tilt: 41.5°
A - Segment: 967-984 - Tilt: 43.0°
B - Segment: 1056-1071 - Tilt: 17.3°
B - Segment: 1080-1094 - Tilt: 12.4°
B - Segment: 1257-1273 - Tilt: 39.8°
B - Segment: 1285-1304 - Tilt: 49.0°
B - Segment: 1758-1777 - Tilt: 33.3°
B - Segment: 1779-1797 - Tilt: 44.8°
B - Segment: 1831-1845 - Tilt: 10.3°
B - Segment: 1891-1908 - Tilt: 32.0°
B - Segment: 1925-1941 - Tilt: 38.8°
B - Segment: 1961-1977 - Tilt: 34.0°
Structural assessment:
MAIDEN score = -163.6129
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]