The membrane rotor of the v-type ATPase from Enterococcus hirae
Organism: Enterococcus hirae
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00137
PDB ID: 2BL2
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.0 Å
Number of TM segments = 40
Sequence positions:
A: 14-28|65-79|91-104|141-155
C: 14-28|65-79|91-104|141-155
B: 14-28|65-79|91-104|141-155
E: 14-28|65-78|92-104|141-155
D: 14-28|65-78|92-104|141-155
G: 14-28|65-79|91-104|141-155
F: 14-28|65-78|92-104|141-155
I: 14-28|65-79|91-104|141-155
H: 14-28|65-79|91-104|141-155
J: 14-28|65-79|91-104|141-155
Tilt angles:
A - Segment: 14-28 - Tilt: 3.5°
A - Segment: 65-79 - Tilt: 17.5°
A - Segment: 91-104 - Tilt: 12.9°
A - Segment: 141-155 - Tilt: 15.3°
C - Segment: 14-28 - Tilt: 3.4°
C - Segment: 65-79 - Tilt: 16.9°
C - Segment: 91-104 - Tilt: 12.3°
C - Segment: 141-155 - Tilt: 14.7°
B - Segment: 14-28 - Tilt: 3.4°
B - Segment: 65-79 - Tilt: 17.2°
B - Segment: 91-104 - Tilt: 12.5°
B - Segment: 141-155 - Tilt: 15.0°
E - Segment: 14-28 - Tilt: 4.1°
E - Segment: 65-78 - Tilt: 25.5°
E - Segment: 92-104 - Tilt: 14.3°
E - Segment: 141-155 - Tilt: 14.2°
D - Segment: 14-28 - Tilt: 3.7°
D - Segment: 65-78 - Tilt: 25.6°
D - Segment: 92-104 - Tilt: 14.1°
D - Segment: 141-155 - Tilt: 14.3°
G - Segment: 14-28 - Tilt: 4.3°
G - Segment: 65-79 - Tilt: 16.5°
G - Segment: 91-104 - Tilt: 13.0°
G - Segment: 141-155 - Tilt: 14.3°
F - Segment: 14-28 - Tilt: 4.2°
F - Segment: 65-78 - Tilt: 25.5°
F - Segment: 92-104 - Tilt: 14.4°
F - Segment: 141-155 - Tilt: 14.3°
I - Segment: 14-28 - Tilt: 4.4°
I - Segment: 65-79 - Tilt: 18.1°
I - Segment: 91-104 - Tilt: 14.0°
I - Segment: 141-155 - Tilt: 15.7°
H - Segment: 14-28 - Tilt: 4.4°
H - Segment: 65-79 - Tilt: 16.6°
H - Segment: 91-104 - Tilt: 13.2°
H - Segment: 141-155 - Tilt: 14.5°
J - Segment: 14-28 - Tilt: 4.1°
J - Segment: 65-79 - Tilt: 17.4°
J - Segment: 91-104 - Tilt: 13.6°
J - Segment: 141-155 - Tilt: 15.5°
Structural assessment:
MAIDEN score = -934.4183
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]