Sr ca(2+)-ATPase in the hne2 state complexed with the thapsigargin derivative boc-12adt
Organism: Oryctolagus cuniculus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00122
PDB ID: 2BY4
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.7 Å
Number of TM segments = 8
Sequence positions:
A: 64-78|88-104|267-284|288-311|839-852|900-916|921-944|970-983
Tilt angles:
A - Segment: 64-78 - Tilt: 26.7°
A - Segment: 88-104 - Tilt: 38.6°
A - Segment: 267-284 - Tilt: 50.4°
A - Segment: 288-311 - Tilt: 63.5°
A - Segment: 839-852 - Tilt: 21.5°
A - Segment: 900-916 - Tilt: 45.8°
A - Segment: 921-944 - Tilt: 46.6°
A - Segment: 970-983 - Tilt: 28.3°
Structural assessment:
MAIDEN score = -28.5174
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]