Sugar free lactose permease at acidic pH
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01306
PDB ID: 2CFP
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 33.0 Å
Number of TM segments = 12
Sequence positions:
A: 10-34|43-67|74-96|104-129|143-162|166-188|222-248|257-279|288-309|312-334|349-373|378-400
Tilt angles:
A - Segment: 10-34 - Tilt: 33.1°
A - Segment: 43-67 - Tilt: 26.9°
A - Segment: 74-96 - Tilt: 16.4°
A - Segment: 104-129 - Tilt: 28.9°
A - Segment: 143-162 - Tilt: 3.7°
A - Segment: 166-188 - Tilt: 20.5°
A - Segment: 222-248 - Tilt: 36.5°
A - Segment: 257-279 - Tilt: 16.5°
A - Segment: 288-309 - Tilt: 10.6°
A - Segment: 312-334 - Tilt: 22.2°
A - Segment: 349-373 - Tilt: 10.1°
A - Segment: 378-400 - Tilt: 20.4°
Structural assessment:
MAIDEN score = -70.8374
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]