Sugar free lactose permease at acidic pH
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01306
PDB ID: 2CFP
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 12
Sequence positions:
A: 7-28|45-59|77-90|104-126|140-154|172-187|227-241|265-283|289-303|320-332|354-370|384-397
Tilt angles:
A - Segment: 7-28 - Tilt: 50.9°
A - Segment: 45-59 - Tilt: 21.7°
A - Segment: 77-90 - Tilt: 29.4°
A - Segment: 104-126 - Tilt: 54.0°
A - Segment: 140-154 - Tilt: 18.7°
A - Segment: 172-187 - Tilt: 31.4°
A - Segment: 227-241 - Tilt: 36.4°
A - Segment: 265-283 - Tilt: 36.3°
A - Segment: 289-303 - Tilt: 21.4°
A - Segment: 320-332 - Tilt: 9.6°
A - Segment: 354-370 - Tilt: 23.5°
A - Segment: 384-397 - Tilt: 34.1°
Structural assessment:
MAIDEN score = -60.2055
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]