Sugar free lactose permease at neutral pH
Organism: Escherichia coli
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01306
PDB ID: 2CFQ
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.4 Å
Number of TM segments = 12
Sequence positions:
A: 15-34|42-59|78-99|103-122|146-163|165-183|226-248|256-275|292-309|312-328|354-373|378-397
Tilt angles:
A - Segment: 15-34 - Tilt: 29.1°
A - Segment: 42-59 - Tilt: 23.5°
A - Segment: 78-99 - Tilt: 26.1°
A - Segment: 103-122 - Tilt: 31.6°
A - Segment: 146-163 - Tilt: 6.7°
A - Segment: 165-183 - Tilt: 24.3°
A - Segment: 226-248 - Tilt: 40.2°
A - Segment: 256-275 - Tilt: 21.5°
A - Segment: 292-309 - Tilt: 12.8°
A - Segment: 312-328 - Tilt: 17.9°
A - Segment: 354-373 - Tilt: 8.0°
A - Segment: 378-397 - Tilt: 29.6°
Structural assessment:
MAIDEN score = -67.5965
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]