Crystal Structure Of Cytochrome B6F Complex with DBMIB From M. Laminosus
Organism: Mastigocladus laminosus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00033
PDB ID: 2D2C
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 27.0 Å
Number of TM segments = 26
Sequence positions:
A: 32-52|88-111|114-131|188-206
C: 257-274
B: 36-54|99-116|126-143
E: 5-23
D: 20-39
G: 10-25
F: 8-27
H: 2-21
O: 36-53|95-115|127-144
N: 32-52|88-107|115-131|188-206
Q: 18-36
P: 259-276
S: 8-27
R: 4-23
U: 3-24
T: 11-25
Tilt angles:
A - Segment: 32-52 - Tilt: 43.1°
A - Segment: 88-111 - Tilt: 38.7°
A - Segment: 114-131 - Tilt: 16.2°
A - Segment: 188-206 - Tilt: 18.0°
C - Segment: 257-274 - Tilt: 7.9°
B - Segment: 36-54 - Tilt: 15.2°
B - Segment: 99-116 - Tilt: 14.1°
B - Segment: 126-143 - Tilt: 11.5°
E - Segment: 5-23 - Tilt: 12.9°
D - Segment: 20-39 - Tilt: 26.5°
G - Segment: 10-25 - Tilt: 6.9°
F - Segment: 8-27 - Tilt: 29.9°
H - Segment: 2-21 - Tilt: 37.6°
O - Segment: 36-53 - Tilt: 14.0°
O - Segment: 95-115 - Tilt: 25.3°
O - Segment: 127-144 - Tilt: 14.6°
N - Segment: 32-52 - Tilt: 44.1°
N - Segment: 88-107 - Tilt: 26.0°
N - Segment: 115-131 - Tilt: 18.4°
N - Segment: 188-206 - Tilt: 15.6°
Q - Segment: 18-36 - Tilt: 26.9°
P - Segment: 259-276 - Tilt: 11.3°
S - Segment: 8-27 - Tilt: 36.7°
R - Segment: 4-23 - Tilt: 7.2°
U - Segment: 3-24 - Tilt: 42.9°
T - Segment: 11-25 - Tilt: 11.8°
Structural assessment:
MAIDEN score = -156.7820
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]