Crystal Structure Of Cytochrome B6F Complex with DBMIB From M. Laminosus
Organism: Mastigocladus laminosus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00033
PDB ID: 2D2C
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 26
Sequence positions:
A: 19-37|77-99|102-117|177-194
C: 598-614
B: 221-236|284-301|308-326
E: 799-817
D: 632-649
G: 868-883
F: 834-852
H: 891-911
O: 1135-1150|1197-1214|1224-1241
N: 933-951|991-1012|1016-1032|1091-1108
Q: 1546-1563
P: 1512-1528
S: 1747-1765
R: 1711-1729
U: 1804-1825
T: 1782-1796
Tilt angles:
A - Segment: 19-37 - Tilt: 38.8°
A - Segment: 77-99 - Tilt: 40.3°
A - Segment: 102-117 - Tilt: 11.0°
A - Segment: 177-194 - Tilt: 22.4°
C - Segment: 598-614 - Tilt: 6.4°
B - Segment: 221-236 - Tilt: 8.8°
B - Segment: 284-301 - Tilt: 13.5°
B - Segment: 308-326 - Tilt: 11.5°
E - Segment: 799-817 - Tilt: 21.9°
D - Segment: 632-649 - Tilt: 26.6°
G - Segment: 868-883 - Tilt: 19.3°
F - Segment: 834-852 - Tilt: 31.1°
H - Segment: 891-911 - Tilt: 40.4°
O - Segment: 1135-1150 - Tilt: 11.6°
O - Segment: 1197-1214 - Tilt: 16.4°
O - Segment: 1224-1241 - Tilt: 8.5°
N - Segment: 933-951 - Tilt: 36.7°
N - Segment: 991-1012 - Tilt: 33.5°
N - Segment: 1016-1032 - Tilt: 6.8°
N - Segment: 1091-1108 - Tilt: 19.2°
Q - Segment: 1546-1563 - Tilt: 30.2°
P - Segment: 1512-1528 - Tilt: 9.2°
S - Segment: 1747-1765 - Tilt: 34.0°
R - Segment: 1711-1729 - Tilt: 12.1°
U - Segment: 1804-1825 - Tilt: 41.8°
T - Segment: 1782-1796 - Tilt: 15.4°
Structural assessment:
MAIDEN score = -161.8791
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]