Integral membrane protein Aquaporin AqpM at 1.68Å resolution
Organism: Methanobacterium thermoautotrophicum
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00230
PDB ID: 2F2B
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.3 Å
Number of TM segments = 6
Sequence positions:
A: 11-28|53-69|100-124|146-163|175-191|221-243
Tilt angles:
A - Segment: 11-28 - Tilt: 29.4°
A - Segment: 53-69 - Tilt: 24.4°
A - Segment: 100-124 - Tilt: 44.0°
A - Segment: 146-163 - Tilt: 27.0°
A - Segment: 175-191 - Tilt: 13.9°
A - Segment: 221-243 - Tilt: 49.8°
Structural assessment:
MAIDEN score = -26.0527
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]