Multidrug Transporter EmrD from Escherichia coli
Organism: Escherichia coli
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF07690
PDB ID: 2GFP
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 29.4 Å
Number of TM segments = 16
Sequence positions:
A: 10-33|42-60|71-91|94-117|133-153|157-177|213-231|236-256|329-351|354-371
B: 11-36|40-60|71-91|94-115|331-351|353-370
Tilt angles:
A - Segment: 10-33 - Tilt: 33.0°
A - Segment: 42-60 - Tilt: 21.7°
A - Segment: 71-91 - Tilt: 16.9°
A - Segment: 94-117 - Tilt: 32.3°
A - Segment: 133-153 - Tilt: 15.0°
A - Segment: 157-177 - Tilt: 29.3°
A - Segment: 213-231 - Tilt: 17.0°
A - Segment: 236-256 - Tilt: 13.6°
A - Segment: 329-351 - Tilt: 31.5°
A - Segment: 354-371 - Tilt: 17.1°
B - Segment: 11-36 - Tilt: 40.0°
B - Segment: 40-60 - Tilt: 16.4°
B - Segment: 71-91 - Tilt: 17.7°
B - Segment: 94-115 - Tilt: 20.7°
B - Segment: 331-351 - Tilt: 27.9°
B - Segment: 353-370 - Tilt: 10.3°
Structural assessment:
MAIDEN score = -50.3259
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]