Human voltage-dependent anion channel
Organism: Homo sapiens
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF01459
PDB ID: 2JK4
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 20
Sequence positions:
A: 6-27|30-38|41-48|60-67|71-78|85-92|97-104|116-123|125-132|142-149|152-158|171-177|181-187|194-199|206-211|222-228|233-241|246-254|257-264|279-287
Tilt angles:
A - Segment: 6-27 - Tilt: 57.7°
A - Segment: 30-38 - Tilt: 46.8°
A - Segment: 41-48 - Tilt: 45.5°
A - Segment: 60-67 - Tilt: 45.5°
A - Segment: 71-78 - Tilt: 39.0°
A - Segment: 85-92 - Tilt: 37.1°
A - Segment: 97-104 - Tilt: 37.4°
A - Segment: 116-123 - Tilt: 36.4°
A - Segment: 125-132 - Tilt: 38.1°
A - Segment: 142-149 - Tilt: 36.4°
A - Segment: 152-158 - Tilt: 31.0°
A - Segment: 171-177 - Tilt: 19.7°
A - Segment: 181-187 - Tilt: 23.2°
A - Segment: 194-199 - Tilt: 31.2°
A - Segment: 206-211 - Tilt: 34.7°
A - Segment: 222-228 - Tilt: 34.5°
A - Segment: 233-241 - Tilt: 44.5°
A - Segment: 246-254 - Tilt: 48.3°
A - Segment: 257-264 - Tilt: 49.6°
A - Segment: 279-287 - Tilt: 50.6°
Structural assessment:
MAIDEN score = 444.9194
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]