Minimal transmembrane beta-barrel platform protein
Organism: Designed proteins
Model: Experimental
Representation: Coarse-grained
Type: β-sheet
Pfam Acc: PF01389
PDB ID: 2JMM
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 20.1 Å
Number of TM segments = 8
Sequence positions:
A: 6-17|23-35|37-48|56-64|75-81|107-112|127-134|136-147
Tilt angles:
A - Segment: 6-17 - Tilt: 55.9°
A - Segment: 23-35 - Tilt: 55.5°
A - Segment: 37-48 - Tilt: 60.5°
A - Segment: 56-64 - Tilt: 41.7°
A - Segment: 75-81 - Tilt: 20.1°
A - Segment: 107-112 - Tilt: 17.6°
A - Segment: 127-134 - Tilt: 34.3°
A - Segment: 136-147 - Tilt: 50.7°
Structural assessment:
MAIDEN score = 282.0649
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]