Proteorhodopsin
Organism: Gamma-proteobacterium
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF01036
PDB ID: 2L6X
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 7
Sequence positions:
A: 32-48|64-78|94-108|123-137|150-163|192-206|221-236
Tilt angles:
A - Segment: 32-48 - Tilt: 40.2°
A - Segment: 64-78 - Tilt: 24.9°
A - Segment: 94-108 - Tilt: 14.1°
A - Segment: 123-137 - Tilt: 24.4°
A - Segment: 150-163 - Tilt: 16.1°
A - Segment: 192-206 - Tilt: 29.6°
A - Segment: 221-236 - Tilt: 20.2°
Structural assessment:
MAIDEN score = -50.1111
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]