Proteorhodopsin
Organism: Gamma-proteobacterium
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF01036
PDB ID: 2L6X
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 22.8 Å
Number of TM segments = 7
Sequence positions:
A: 15-32|48-63|74-88|109-124|129-143|174-189|203-219
Tilt angles:
A - Segment: 15-32 - Tilt: 34.1°
A - Segment: 48-63 - Tilt: 14.1°
A - Segment: 74-88 - Tilt: 18.0°
A - Segment: 109-124 - Tilt: 7.6°
A - Segment: 129-143 - Tilt: 16.8°
A - Segment: 174-189 - Tilt: 16.7°
A - Segment: 203-219 - Tilt: 24.9°
Structural assessment:
MAIDEN score = -26.9530
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]