Influenza AM2-BM2 chimeric channel bound to rimantadine
Organism: Influenza virus
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF00599
PDB ID: 2LJC
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 37.2 Å
Number of TM segments = 4
Sequence positions:
A: 25-49
C: 26-49
B: 25-49
D: 26-49
Tilt angles:
A - Segment: 25-49 - Tilt: 23.1°
C - Segment: 26-49 - Tilt: 22.0°
B - Segment: 25-49 - Tilt: 21.0°
D - Segment: 26-49 - Tilt: 23.5°
Structural assessment:
MAIDEN score = -29.4790
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]