Influenza AM2-BM2 chimeric channel bound to rimantadine
Organism: Influenza virus
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF00599
PDB ID: 2LJC
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 24.0 Å
Number of TM segments = 4
Sequence positions:
A: 4-19
C: 65-80
B: 34-49
D: 94-109
Tilt angles:
A - Segment: 4-19 - Tilt: 15.1°
C - Segment: 65-80 - Tilt: 25.1°
B - Segment: 34-49 - Tilt: 16.3°
D - Segment: 94-109 - Tilt: 25.5°
Structural assessment:
MAIDEN score = -40.8699
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]