Amyloid precursor protein's transmembrane domain
Organism: Homo sapiens
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF03494
PDB ID: 2LLM
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 34.5 Å
Number of TM segments = 1
Sequence positions:
A: 11-40
Tilt angles:
A - Segment: 11-40 - Tilt: 45.7°
Structural assessment:
MAIDEN score = -15.4014
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]