Transmembrane domains of the nAChR a4 subunit
Organism: Homo sapiens
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02932
PDB ID: 2LLY
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.1 Å
Number of TM segments = 4
Sequence positions:
A: 14-34|36-57|64-88|107-130
Tilt angles:
A - Segment: 14-34 - Tilt: 42.3°
A - Segment: 36-57 - Tilt: 46.5°
A - Segment: 64-88 - Tilt: 51.2°
A - Segment: 107-130 - Tilt: 53.2°
Structural assessment:
MAIDEN score = -45.1952
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]