Membrane anchor domain of the trimeric autotransporter YadA
Organism: Yersinia enterocolitica
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF03895
PDB ID: 2LME
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 21.0 Å
Number of TM segments = 3
Sequence positions:
A: 30-44
C: 31-44
B: 30-44
Tilt angles:
A - Segment: 30-44 - Tilt: 14.2°
C - Segment: 31-44 - Tilt: 13.8°
B - Segment: 30-44 - Tilt: 18.9°
Structural assessment:
MAIDEN score = -7.8556
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]