Transmembrane domain of amyloid precursor protein V44M
Organism: Homo sapiens
Model: Experimental
Representation: Coarse-grained
Type: α-helical
Pfam Acc: PF03494
PDB ID: 2LZ4
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 37.0 Å
Number of TM segments = 2
Sequence positions:
A: 2-26
B: 30-54
Tilt angles:
A - Segment: 2-26 - Tilt: 22.0°
B - Segment: 30-54 - Tilt: 23.0°
Structural assessment:
MAIDEN score = -25.2348
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]