Full-length transmembrane domains of human glycine receptor alpha1 subunit
Organism: Homo sapiens
Model: Experimental
Representation: Atomistic
Type: α-helical
Pfam Acc: PF02932
PDB ID: 2M6I
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 26.0 Å
Number of TM segments = 20
Sequence positions:
A: 227-243|249-264|285-302|401-417
C: 227-243|249-264|285-302|399-416
B: 227-243|249-264|285-302|399-416
E: 225-242|249-264|285-302|401-418
D: 226-243|249-264|285-302|401-417
Tilt angles:
A - Segment: 227-243 - Tilt: 18.6°
A - Segment: 249-264 - Tilt: 20.2°
A - Segment: 285-302 - Tilt: 26.8°
A - Segment: 401-417 - Tilt: 17.0°
C - Segment: 227-243 - Tilt: 19.6°
C - Segment: 249-264 - Tilt: 18.8°
C - Segment: 285-302 - Tilt: 26.4°
C - Segment: 399-416 - Tilt: 20.7°
B - Segment: 227-243 - Tilt: 18.3°
B - Segment: 249-264 - Tilt: 18.8°
B - Segment: 285-302 - Tilt: 25.7°
B - Segment: 399-416 - Tilt: 20.6°
E - Segment: 225-242 - Tilt: 28.6°
E - Segment: 249-264 - Tilt: 21.2°
E - Segment: 285-302 - Tilt: 28.2°
E - Segment: 401-418 - Tilt: 25.8°
D - Segment: 226-243 - Tilt: 26.4°
D - Segment: 249-264 - Tilt: 20.2°
D - Segment: 285-302 - Tilt: 27.8°
D - Segment: 401-417 - Tilt: 19.1°
Structural assessment:
MAIDEN score = -170.6123
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]