Opa60 from N. gonorrhoeae
Organism: Neisseria gonorrhoeae
Model: Experimental
Representation: Atomistic
Type: β-sheet
Pfam Acc: PF02462
PDB ID: 2MAF
Membrane assignment:
Output PDB file Download
Hydrophobic thickness = 23.0 Å
Number of TM segments = 8
Sequence positions:
A: 10-16|52-60|65-74|115-125|131-143|190-202|206-216|228-237
Tilt angles:
A - Segment: 10-16 - Tilt: 24.3°
A - Segment: 52-60 - Tilt: 34.0°
A - Segment: 65-74 - Tilt: 34.0°
A - Segment: 115-125 - Tilt: 45.4°
A - Segment: 131-143 - Tilt: 61.1°
A - Segment: 190-202 - Tilt: 58.1°
A - Segment: 206-216 - Tilt: 44.0°
A - Segment: 228-237 - Tilt: 13.7°
Structural assessment:
MAIDEN score = 5.3063
The MAIDEN score is aimed at assessing the relative quality, i.e. ranking several models (the lower the score, the better the model). It comes here with a color code (red > yellow > green > blue), which is derived from a z-score calculation and indicates the absolute quality.
Scores for all residue pairs Download
[creation date: Sep-08-2016]